Functional design for operational earth resources ground data processing

The author has identified the following significant results. Study emphasis was on developing a unified concept for the required ground system, capable of handling data from all viable acquisition platforms and sensor groupings envisaged as supporting operational earth survey programs. The platforms considered include both manned and unmanned spacecraft in near earth orbit, and continued use of low and high altitude aircraft. The sensor systems include both imaging and nonimaging devices, operated both passively and actively, from the ultraviolet to the microwave regions of the electromagnetic spectrum

Instantons, supersymmetric vacua, and emergent geometries

We study instanton solutions and superpotentials for the large number of vacua of the plane-wave matrix model and a 2+1 dimensional Super Yang-Mills theory on $R\times S^2$ with sixteen supercharges. We get the superpotential in the weak coupling limit from the gauge theory description. We study the gravity description of these instantons. Perturbatively with respect to a background, they are Euclidean branes wrapping cycles in the dual gravity background. Moreover, the superpotential can be given by the energy of the electric charge system characterizing each vacuum. These charges are interpreted as the eigenvalues of matrices from a reduction for the 1/8 BPS sector of the gauge theories. We also discuss qualitatively the emergence of the extra spatial dimensions appeared on the gravity side.Comment: 29 pages, 3 figures, latex. v2: references added, comments added. v3: accepted version in PR

Down-regulation of Cdc6, a cell cycle regulatory gene, in prostate cancer

CDC6 plays a critical role in regulation of the onset of DNA replication in eukaryotic cells. We have found that Cdc6 expression is down-regulated in prostate cancer as detected by semiquantitative reverse transcriptase-PCR of prostate cell lines and laser-captured microdissected prostate tissues. This result was substantiated by immunohistochemical analysis of paraffin-embedded tissue sections and immunoblot analysis of benign (BPH-1) and adenocarcinomatous prostatic cells. Furthermore, a 100-fold reduction in the transcription efficiency of the Cdc6 promoter-luciferase construct was noted in the metastatic PC3 cells compared with that in BPH-1 cells. Concentration of the E2F and Oct1 transcription factors that have putative binding sites in the Cdc6 promoter was substantially low in PC3 cells compared with BPH cells. Mutagenesis of the two E2F binding sites on the Cdc6 promoter resulted in increased promoter activity in PC3 cells owing to elimination of the negative regulation by pRb-E2F complex but not to the level of that obtained in BPH cells. We conclude that an altered interaction of transcription factors may be responsible for the down-regulation of Cdc6 transcription in PC3 cells. Our study suggests a potential use of the lack of CDC6 expression as an index of prostate cancer development

Down-regulation of Cdc6, a cell cycle regulatory gene, in prostate cancer

CDC6 plays a critical role in regulation of the onset of DNA replication in eukaryotic cells. We have found that Cdc6 expression is down-regulated in prostate cancer as detected by semiquantitative reverse transcriptase-PCR of prostate cell lines and laser-captured microdissected prostate tissues. This result was substantiated by immunohistochemical analysis of paraffin-embedded tissue sections and immunoblot analysis of benign (BPH-1) and adenocarcinomatous prostatic cells. Furthermore, a 100-fold reduction in the transcription efficiency of the Cdc6 promoter-luciferase construct was noted in the metastatic PC3 cells compared with that in BPH-1 cells. Concentration of the E2F and Oct1 transcription factors that have putative binding sites in the Cdc6 promoter was substantially low in PC3 cells compared with BPH cells. Mutagenesis of the two E2F binding sites on the Cdc6 promoter resulted in increased promoter activity in PC3 cells owing to elimination of the negative regulation by pRb-E2F complex but not to the level of that obtained in BPH cells. We conclude that an altered interaction of transcription factors may be responsible for the down-regulation of Cdc6 transcription in PC3 cells. Our study suggests a potential use of the lack of CDC6 expression as an index of prostate cancer development

Cold collisions of OH and Rb. I: the free collision

We have calculated elastic and state-resolved inelastic cross sections for cold and ultracold collisions in the Rb($^1 S$) + OH($^2 \Pi_{3/2}$) system, including fine-structure and hyperfine effects. We have developed a new set of five potential energy surfaces for Rb-OH($^2 \Pi$) from high-level {\em ab initio} electronic structure calculations, which exhibit conical intersections between covalent and ion-pair states. The surfaces are transformed to a quasidiabatic representation. The collision problem is expanded in a set of channels suitable for handling the system in the presence of electric and/or magnetic fields, although we consider the zero-field limit in this work. Because of the large number of scattering channels involved, we propose and make use of suitable approximations. To account for the hyperfine structure of both collision partners in the short-range region we develop a frame-transformation procedure which includes most of the hyperfine Hamiltonian. Scattering cross sections on the order of $10^{-13}$ cm$^2$ are predicted for temperatures typical of Stark decelerators. We also conclude that spin orientation of the partners is completely disrupted during the collision. Implications for both sympathetic cooling of OH molecules in an environment of ultracold Rb atoms and experimental observability of the collisions are discussed.Comment: 20 pages, 16 figure

Mechanical basis of morphogenesis and convergent evolution of spiny seashells

Convergent evolution is a phenomenon whereby similar traits evolved independently in not closely related species, and is often interpreted in functional terms. Spines in mollusk seashells are classically interpreted as having repeatedly evolved as a defense in response to shell-crushing predators. Here we consider the morphogenetic process that shapes these structures and underlies their repeated emergence. We develop a mathematical model for spine morphogenesis based on the mechanical interaction between the secreting mantle edge and the calcified shell edge to which the mantle adheres during shell growth. It is demonstrated that a large diversity of spine structures can be accounted for through small variations in control parameters of this natural mechanical process. This physical mechanism suggests that convergent evolution of spines can be understood through a generic morphogenetic process, and provides unique perspectives in understanding the phenotypic evolution of this second largest phylum in the animal kingdom.\ud \ud Homoplasy, the appearance of similar traits in separate evolutionary lineages as a result of convergence, parallelism, or evolutionary reversals, is a major concern in phylogenetic analysis for which it is viewed as noise. However, over the past two decades, homoplasy has also become a subject of increasing interest, stimulated by the rise of evolutionary developmental biology (evo devo) and the wish to uncover the developmental basis of this phenomenon (1⇓–3). Spines constitute the most prominent ornamentation of mollusk shells and have evolved in many distantly related fossil and current mollusk species (at least 55 genera and 21 families of current gastropods; 10 genera and 8 families of current bivalves; 11 genera and 8 families of ammonoids; and 6 fossil nautiloid genera; see Fig. 1 for examples). Convergent evolution of spines in mollusks has been addressed in functional terms, these structures being interpreted as having evolved as a defense in response to shell-crushing predators (4⇓–6). This hypothesis is itself the basis of the widely cited “escalation hypothesis,” according to which long-term trends in the fossil record were caused by the evolutionary response of prey to predation pressure (7). The idea that convergent evolution of similar mollusk ornamentations might be fully explained in functional terms is based on the premise that similar characters, perceived as well designed for a presumed function, cannot conceivably have independently evolved fortuitously. Therefore, natural selection is thought to have repeatedly shaped similar functional traits out of random variations

Physical Electronics

Contains reports on three research projects

Comparison of 3-Factor Prothrombin Complex Concentrate and Low-Dose Recombinant Factor VIIa for Warfarin Reversal

INTRODUCTION: Prothrombin complex concentrate (PCC) and recombinant Factor VIIa (rFVIIa) have been used for emergent reversal of warfarin anticoagulation. Few clinical studies have compared these agents in warfarin reversal. We compared warfarin reversal in patients who received either 3 factor PCC (PCC3) or low-dose rFVIIa (LDrFVIIa) for reversal of warfarin anticoagulation. METHODS: Data were collected from medical charts of patients who received at least one dose of PCC3 (20 units/kg) or LDrFVIIa (1000 or 1200 mcg) for emergent warfarin reversal from August 2007 to October 2011. The primary end-points were achievement of an INR 1.5 or less for efficacy and thromboembolic events for safety. RESULTS: Seventy-four PCC3 and 32 LDrFVIIa patients were analyzed. Baseline demographics, reason for warfarin reversal, and initial INR were equivalent. There was no difference in the use of vitamin K or fresh frozen plasma. More LDrFVIIa patients achieved an INR of 1.5 or less (71.9% vs. 33.8%, p =0.001). The follow-up INR was lower after LDrFVIIa (1.25 vs. 1.75, p < 0.05) and the percent change in INR was larger after LDrFVIIa (54.1% vs. 38.8%, p = 0.002). There was no difference in the number of thromboembolic events (2 LDrFVIIa vs. 5 PCC3, p = 1.00), mortality, length of hospital stay, or cost. CONCLUSIONS: Based on achieving a goal INR of 1.5 or less, LDrFVIIa was more likely than PCC3 to reverse warfarin anticoagulation. Thromboembolic events were equivalent in patients receiving PCC3 and LDrFVIIa

Phonon-Coupled Electron Tunneling in Two and Three-Dimensional Tunneling Configurations

We treat a tunneling electron coupled to acoustical phonons through a realistic electron phonon interaction: deformation potential and piezoelectric, in two or three-dimensional tunneling configurations. Making use of slowness of the phonon system compared to electron tunneling, and using a Green function method for imaginary time, we are able to calculate the change in the transition probability due to the coupling to phonons. It is shown using standard renormalization procedure that, contrary to the one-dimensional case, second order perturbation theory is sufficient in order to treat the deformation potential coupling, which leads to a small correction to the transmission coefficient prefactor. In the case of piezoelectric coupling, which is found to be closely related to the piezoelectric polaron problem, vertex corrections need to be considered. Summing leading logarithmic terms, we show that the piezoelectric coupling leads to a significant change of the transmission coefficient.Comment: 17 pages, 4 figure

Physical Electronics

Contains reports on three research projects